PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT25800.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 165aa    MW: 18099.4 Da    PI: 9.0462
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT25800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.21.1e-142168253
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                +y+GVr ++ +gr++AeIrdp     +   +++lg+f+t  eA  a++a + ++
  PHT25800.1 21 HYRGVRKRP-WGRYAAEIRDP-----HrkCKVWLGTFDTTVEAGIAYDATAIAY 68
                7********.**********6.....2269*******************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MAHRHRHMAA VTATTVEKEV HYRGVRKRPW GRYAAEIRDP HRKCKVWLGT FDTTVEAGIA  60
YDATAIAYDA TAIEFRGVKA KTNFPIPVDL TRSPSETQNN LDARGGGGGL DRGEMFHTNG  120
FGSVIMGSDA GDLSKSDFSS VVDFMGNDTK GIQLDLNFPP VPKKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-27ERF family protein