PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT26074.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 373aa    MW: 43540.7 Da    PI: 9.923
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT26074.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.21.5e-1317951099
                HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                 +k+g l +p  f++  +g   ++++  +  + +++W vk+  +       l++GWk+F+k+++L+ gD +vF+++g++ef  +v++f++
  PHT26074.1 17 GFKRG-LKIPIGFLRYLKGL--KHIKHAILRRASKKWLVKV--NCW----RLEDGWKKFAKEHDLQLGDLLVFRHEGHMEF--KVSIFDS 95
                55665.9*******555555..3556788889*********..333....399**********************999999..9*99987 PP
2B350.73.2e-16141222590
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                  ++++  ++g l+lp++fa+++g+ + ++  ++++de+ rsW+++l    ++  + + +GW +F+  n+LkegD ++F+++ + ++
  PHT26074.1 141 IVRPYCVSNGYLRLPRQFARANGLMN-KKLGVIIRDERQRSWNLRL--ATYGLNVHIYNGWDDFCVVNNLKEGDYMMFEVVAN-GE 222
                 56789999**************5553.3446***************..9999999999*********************8874.33 PP
3B354.52.1e-17263342587
                 -..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 +++++++++++l+lpk+f++++ +++k    +++l de+ rsW+v l  +  ++++ +++GW +F kang+++gD+ +F+l+++
  PHT26074.1 263 TIKHYTFTKAILYLPKDFTKSNdMMDK---HEMILVDEKQRSWTVWL-GKMDPRHFGIKSGWPQFRKANGVQVGDTYMFELTDN 342
                 568999****************54443...47***************.577777799***********************9874 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MKIAPKKPHF FKPIMPGFKR GLKIPIGFLR YLKGLKHIKH AILRRASKKW LVKVNCWRLE  60
DGWKKFAKEH DLQLGDLLVF RHEGHMEFKV SIFDSSHCDR EYAEYLREEE ESNTIEETSK  120
KVKFKEAAIH NPCGQSRFEC IVRPYCVSNG YLRLPRQFAR ANGLMNKKLG VIIRDERQRS  180
WNLRLATYGL NVHIYNGWDD FCVVNNLKEG DYMMFEVVAN GEKPIWKFRL IKDLRHKALD  240
MTTPISQIPA STSADANPHF ISTIKHYTFT KAILYLPKDF TKSNDMMDKH EMILVDEKQR  300
SWTVWLGKMD PRHFGIKSGW PQFRKANGVQ VGDTYMFELT DNGTIPIMHV HYMKEPTVDV  360
MASLSCSAPI EKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.13e-51B3 family protein