PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT26312.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 157aa    MW: 18202.6 Da    PI: 8.6225
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT26312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.84.4e-53121401128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGf FhPtdee v +yL+kk+++++++l +vi+++d+y++ePwdL+ k  + ++e+kewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k
  PHT26312.1  12 VPPGFLFHPTDEEPVGYYLRKKIAAQNIDL-DVIRDIDLYRIEPWDLQgKcgMGYEEQKEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYD-K 108
                 69****************************.9***************953544445778**************************************.9 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++l+g++ktLvfy+grap+g+kt+W+mheyr+
  PHT26312.1 109 SKLIGMRKTLVFYRGRAPNGHKTEWIMHEYRF 140
                 99****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MMDANESSSS CVPPGFLFHP TDEEPVGYYL RKKIAAQNID LDVIRDIDLY RIEPWDLQGK  60
CGMGYEEQKE WYFFSHKDKK YPTGTRTNRA TMAGFWKATG RDKAVYDKSK LIGMRKTLVF  120
YRGRAPNGHK TEWIMHEYRF ESQENSPSQA SLASISL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.14e-91NAC family protein