PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT26387.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 277aa MW: 31274.3 Da PI: 7.6784

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT26387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.6	2.2e-13	65	111	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr+llP+ K +Ka+ L +Av+++++L PHT26387.1 65 KSHSEAERRRRKRINGHLATLRTLLPNT-----IKTDKASLLAEAVRCVREL 111 69***********************8.....6************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MYQFPSFYEL GVNTCSDSYN NFLHEFINSS SSDQMFNNNN NINYVESSSV SPRSMAEAKA 60 IAANKSHSEA ERRRRKRING HLATLRTLLP NTIKTDKASL LAEAVRCVRE LKKTTSELEA 120 TTTTMSEYDD DNNDNDRTTF MKTVMFPSES DELNISYCRS NSSISNNNST DNSNETFIIK 180 ASICCEDRPD IMMELKRALN SVQCKVVRAE MSTVGGRIKC VLWLELLENG CKEGLLVQLR 240 RALKVVMDKN NFGPQNMGQD LLGNKRPRLL GGPMNYV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	1e-30	bHLH family protein