PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT26404.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 324aa    MW: 36471.3 Da    PI: 4.8245
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT26404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66.3e-10141184755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + Er+RR ++++++  Lr+l+P+      +K++Ka+i   A+ Y++ Lq
  PHT26404.1 141 ISERKRRGKMKEKLYALRSLVPNI-----TKMDKASIIGDAILYVQGLQ 184
                 67*********************7.....7*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MESANASTIM SMENNVKDVG LINFLDEDNF EQFIELIRGE TGDPIVKFCP TYDCEYITGC  60
FSAANAQFEP TSMDFNDWNT TRMSDPFSLY TSLPGKMKIH EEDEEEDNDC DESSATMTTT  120
TVTPGTPTKK STRTDRSRTL ISERKRRGKM KEKLYALRSL VPNITKMDKA SIIGDAILYV  180
QGLQTKAEIL KVEIADFESS HNGMNNNQGG IFQSAMKTNF TSYFPTIKRI TKMVVIKVEE  240
KGFYVRLVCY KGRQVAASLF KALESLTGFN VQSSNLATAS NDYVLTFTLN VRECEMDRNF  300
SNLKLWIASA FGNLGFDFET SPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-64bHLH family protein