PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT26610.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 173aa    MW: 19675.7 Da    PI: 10.2412
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT26610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.5e-111664654
                HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                + +E++RR+++++ +++L +++P+ a ++++ K++  +    Av+YI sL
  PHT26610.1 16 KYVEKNRRNHMKNLYNQLHSMIPThA-STSKAKMTVPDQIDAAVNYIESL 64
                568*********************55.99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MESCLNSKSA PKLERKYVEK NRRNHMKNLY NQLHSMIPTH ASTSKAKMTV PDQIDAAVNY  60
IESLKMNLEK SKKHLKELKL GPKRAQSLNA TNEPGPTTKS PTQIEFHEMG LNLVVILITS  120
LDNIATFNNI IRLCHREEGV EVVSTSFKLN GGSTLQIYRE TKVSDKYTLR HKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-16bHLH family protein