PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT27202.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 226aa    MW: 24856.8 Da    PI: 8.3267
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT27202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.42.6e-18261021799
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +pkkfa++    ++ +  ++l+ +sg +W+v+l  +  +++ +l++GWkeFv+a+ L+e D ++Fk++g+s+f   v+vf++
  PHT27202.1  26 AIPKKFANNLR--EKLGDSVSLTGPSGATWNVRL--TLIGDALFLKDGWKEFVDAHSLEEDDLLIFKYNGSSRF--DVSVFDR 102
                 69*****5444..457779***************..889999**************************998999..9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MSLVEVGAEI GVQDEVRVRV ELGLEAIPKK FANNLREKLG DSVSLTGPSG ATWNVRLTLI  60
GDALFLKDGW KEFVDAHSLE EDDLLIFKYN GSSRFDVSVF DRQSLCEKEA SCFVKKCEHA  120
DVASRSRTKR HTPREYSSRD VSEAPPTKKP KLAATPTSED TSKSSSHDEY EPPAKKKTLA  180
STSTSADTNE SSSHNECEAP TKKKTMLAST STSRTRSARA NAKLRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125130RSRTKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-25B3 family protein