PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT27226.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 149aa    MW: 16523 Da    PI: 9.0511
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT27226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.51.4e-0751100255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GV+ +  +g++ A  rdp+    +  ++ lg+f+t ee  +a++ ++ +++g
  PHT27226.1  51 HYRGVWKRL-SGKYTAATRDPR----KiCNVLLGTFDTMEEGGQAYDTMAIEFRG 100
                 6****7666.8******9**83....359*********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MYLPHDAQEA PGSSLLRRHL RQLKGVTRVE NVNGGVAKAE EKVKGVAEEV HYRGVWKRLS  60
GKYTAATRDP RKICNVLLGT FDTMEEGGQA YDTMAIEFRG VKVKMNFLNL MDEMNRTPSQ  120
VSTVESLNVV AVVEIQPSPL PLPPPQPPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.15e-20ERF family protein