PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT27331.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 297aa MW: 33239.7 Da PI: 7.1227

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT27331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.8	1.4e-39	25	85	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ +kcprCds+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ s PHT27331.1 25 EQQPQKCPRCDSANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRPS 85 57899*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MSSQTLESML VCTKPEQEKK PRPAEQQPQK CPRCDSANTK FCYYNNYSLS QPRYFCKSCR 60 RYWTKGGTLR NVPVGGGCRK NKRPSSSSKR SQDNSPNSNN PISPLSIPTI SSYDHSSTDL 120 SLAFARLQKQ ASGHLGIDQE HDDDDNNNNN MSMLYNPDNT STTVPSSFLD ALRGGSFLEN 180 APNGFHHKMY YGNYGGMLGA NSEEMGMNYD QEMSIGTTSA STIMTTTVKQ EMCGMARSSE 240 GDQNNNSKVL WGFPWQQMNE DHLNNMNMSD FESTNRQNWS AFGVSSNWHG LINSPLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	4e-33	Dof family protein