PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT27407.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 230aa    MW: 26644 Da    PI: 10.3117
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT27407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1752.1e-54181451128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 lppGfrFhPtdeelvv+yLkkkv + ++++ ++i+evd+yk++Pw+Lp+k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+v+++ +++
  PHT27407.1  18 LPPGFRFHPTDEELVVHYLKKKVVTAPIPV-DIIAEVDLYKFDPWELPAKAIFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVFTSgGNK 115
                 79****************************.99***************7777899**************************************997778 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                 +vg+kk Lvfy g+ pkg+kt+W+mheyr+
  PHT27407.1 116 KVGVKKALVFYGGKPPKGVKTNWIMHEYRV 145
                 8***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MESTDSSTAT RHQQPHQLPP GFRFHPTDEE LVVHYLKKKV VTAPIPVDII AEVDLYKFDP  60
WELPAKAIFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK ATGTDKPVFT SGGNKKVGVK  120
KALVFYGGKP PKGVKTNWIM HEYRVAENKI NNKPLGCDTI XXXXXXXXXX XXXXXXXXXX  180
XXXXXXXXXX XXXXXLIKVL NFLTKKFIYM IVKKRRRENT LFPPLNYEQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.18e-88NAC family protein