PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT27479.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 165aa    MW: 18456.8 Da    PI: 10.4636
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT27479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA92.17.2e-292074358
   CBFB_NFYA  3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                p+YVNaKQy++IlkRRq Rak ++++kl  k+rkpylheSR  hA++R+RgsgG F
  PHT27479.1 20 PIYVNAKQYSAILKRRQVRAKRQAQNKL-VKNRKPYLHESRNCHAMKRARGSGGCF 74
                9***************************.*************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MVGVTSTRVA LSLECTESLP IYVNAKQYSA ILKRRQVRAK RQAQNKLVKN RKPYLHESRN  60
CHAMKRARGS GGCFLNTKNM QQSKPSSPKH DRNIFNHQVG GNISSYMVQH SESSSWGTST  120
QSGSNVTSIF NGDDMSQQPE FRVSGFPFHM GATMQEAEDF MHVGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-29NF-YA family protein