PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT27496.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 236aa    MW: 26968.2 Da    PI: 9.1494
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT27496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.17.5e-19942245128
         NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrd....kkyatgkrknr.atksgyWkatgkdkev 92 
                 +rFhPtdeel+ +yL k v+ k+ ++ + i+  d++ + +Pw++ +      +++ +k  yfF++ +    kk++ g+r  r ++  g Wk    +k+v
  PHT27496.1  94 LRFHPTDEELI-RYLLKFVSCKNYSC-DNIRFEDLFgNQKPWEIFEsnssgDAEEAKKVKYFFTQLHaqlkKKKSGGTRFIRtVIGGGSWKGLDCEKSV 190
                 69*********.9**********999.7799999872569****6323443333344455***97651111445568899997889************* PP

         NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ + +lvg kk   +   +  ++    W+m ey+l
  PHT27496.1 191 YD-GPKLVGHKKNYRYQ-HKGYQADDVVWTMREYSL 224
                 **.999********997.67777789********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MMILLVREPD CDYCSVKVVL PGKEYDAPAN GGFKRWFRYS VAAATVISEC RIYIPSVVSP  60
HGSRTKLLVL VLLFCDPFGL LSQLGVCPNG SLILRFHPTD EELIRYLLKF VSCKNYSCDN  120
IRFEDLFGNQ KPWEIFESNS SGDAEEAKKV KYFFTQLHAQ LKKKKSGGTR FIRTVIGGGS  180
WKGLDCEKSV YDGPKLVGHK KNYRYQHKGY QADDVVWTMR EYSLDEKILK ALRRDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-13NAC family protein