PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT27524.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 252aa    MW: 27840.2 Da    PI: 9.2543
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT27524.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.82.6e-15601282799
                 ---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ++ ++ +  ++l+ +sg +W+v+l  +  +++ +l++GWkeFv a+ L+e D ++Fk++g+s+f   v+vf++
  PHT27524.1  60 NLREKLGDSVSLTGPSGATWNVRL--TLIGDALFLKDGWKEFVGAHSLEEDDLLIFKYNGSSRF--DVSVFDR 128
                 555667779***************..889999**************************998999..9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MSLVRVGAEI GVQAEVRVRV ELGLEVKGSR DKCDKGAYRL KVGFRNIRTL QGHSQKICHN  60
LREKLGDSVS LTGPSGATWN VRLTLIGDAL FLKDGWKEFV GAHSLEEDDL LIFKYNGSSR  120
FDVSVFDRQS LCEKEASCFV KKCEHADVAS RSRTKRHTPR EYSSRDVSEA PPTKKPNLAA  180
TPTSEDTSRS SSHDEYEPPA KKKTLASTST SVDTNEFSSH NECESPTEKK TTLASTSTSR  240
TRSARANAKL LS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151156RSRTKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-22B3 family protein