PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT27743.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 557aa MW: 61824.8 Da PI: 6.593

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT27743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83.5	2.3e-26	318	370	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +++WtpeLH++Fv+ave+L G+++A+P++ilelmkv+gLt+++++SHLQk+R+ PHT27743.1 318 IKVDWTPELHKKFVKAVEKL-GIDQAIPSRILELMKVEGLTRHNIASHLQKFRM 370 5899**************.******************************8 PP
2	Myb_DNA-binding	42.5	1.5e-13	320	369	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av++lG + +++I + m +g+t+ ++ s++qk++ PHT27743.1 320 VDWTPELHKKFVKAVEKLGIDqaIPSRILELMKvEGLTRHNIASHLQKFR 369 57**********************************************97 PP
3	Response_reg	33.5	2.2e-12	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+ d++ + ++ +r+ le+ +y +v ++ + +eal + k +++ ++ ++ ++dG lk ++ ++ +lp i+v+ + +++ +++ +Ga PHT27743.1 20 VLLLDKDSNSASDMRSRLEEMEY-IVYAFCNETEALSAISSKSevFHVAIVEVSAGNSDG--GLKFLEGAK-DLPTIMVSNIHSISTMMKCIALGAV 112 8999*****************.***********777778********877..345555555.8***9999********* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +fl Kp + ++l++ PHT27743.1 113 EFLQKPLSDDKLRN 126 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MVCTENDLLG WKDFPKGLRV LLLDKDSNSA SDMRSRLEEM EYIVYAFCNE TEALSAISSK 60 SEVFHVAIVE VSAGNSDGGL KFLEGAKDLP TIMVSNIHSI STMMKCIALG AVEFLQKPLS 120 DDKLRNIWQH VVHKAFHSGG KNVAESLKPV KESLLSMLEL QPVKREADSE NSNEAEPLTS 180 VLENQKESPP SCDKYPAPST PQHKQGVKSV DDGDFQDHTI LSNEQDSEVH EGDTKSVETT 240 CCDSVAETSI LADSAGRLEA AITKEERDSA ADQNMEDPIA TCSRSNDYPA DGSTRSAESN 300 KASGLHSSSG TKANKKKIKV DWTPELHKKF VKAVEKLGID QAIPSRILEL MKVEGLTRHN 360 IASHLQKFRM QRRQILPKED EKRWPRPQLR DSVQRTYYYP PKPVMAFPTY HPNNAPTAGQ 420 FYPPWIPPGG YPNGVHMWGS PYYPGWQPPE NWHWNPHSGL YADVWGCPVT PPSLGSCTPY 480 LQNASGIHNR YSIIQKSVDL HPAEEVIDKV VKEAIHKPWL PLPLGLKSPS TESVLDALSK 540 QGISAVPSRI NGSRRPH

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MVCTENDLLG WKDFPKGLRV LLLDKDSNSA SDMRSRLEEM EYIVYAFCNE TEALSAISSK  60
SEVFHVAIVE VSAGNSDGGL KFLEGAKDLP TIMVSNIHSI STMMKCIALG AVEFLQKPLS  120
DDKLRNIWQH VVHKAFHSGG KNVAESLKPV KESLLSMLEL QPVKREADSE NSNEAEPLTS  180
VLENQKESPP SCDKYPAPST PQHKQGVKSV DDGDFQDHTI LSNEQDSEVH EGDTKSVETT  240
CCDSVAETSI LADSAGRLEA AITKEERDSA ADQNMEDPIA TCSRSNDYPA DGSTRSAESN  300
KASGLHSSSG TKANKKKIKV DWTPELHKKF VKAVEKLGID QAIPSRILEL MKVEGLTRHN  360
IASHLQKFRM QRRQILPKED EKRWPRPQLR DSVQRTYYYP PKPVMAFPTY HPNNAPTAGQ  420
FYPPWIPPGG YPNGVHMWGS PYYPGWQPPE NWHWNPHSGL YADVWGCPVT PPSLGSCTPY  480
LQNASGIHNR YSIIQKSVDL HPAEEVIDKV VKEAIHKPWL PLPLGLKSPS TESVLDALSK  540
QGISAVPSRI NGSRRPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-134	ARR-B family protein