PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT27870.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 383aa MW: 44106.1 Da PI: 6.6975

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT27870.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	92.7	4.5e-29	161	248	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p PHT27870.1 161 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHSHPLCP 248 9***************************************9988..9*************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MSLETAKIAD FLCLIEPNQL STSQRSQRPH FNHSPEPSIP LSLLSVTPPP PRPTFCLFLL 60 TFTTWIHFVI YRIFMEFVVD DHVNGEEEEG TVVELRAVDE NVIGGSSSEE ALQQVHDVKV 120 DEDLPEREDL LLEEAQCLDN STSDEPYVGL EFESEAAAHA FYNAYATRVG FIIRVSKLSR 180 SRRDGSAIGR ALVCNKEGFR MPDKREKIVR QRAETRVGCR AMILVRKVNS GKWVVTKFVK 240 EHSHPLCPGK GRRDLIYDQY PNEHDKIREL SQQLAAEKKR SATYKRHLEM IFEHIEEHNQ 300 SLSKKIQDIV HNDEKDDRIQ ELTAELRIKK RLTAACREQL LSLMKDVESH TEHLSTKVQA 360 VRSILEELEA KKQELSNHSR HHK

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MSLETAKIAD FLCLIEPNQL STSQRSQRPH FNHSPEPSIP LSLLSVTPPP PRPTFCLFLL  60
TFTTWIHFVI YRIFMEFVVD DHVNGEEEEG TVVELRAVDE NVIGGSSSEE ALQQVHDVKV  120
DEDLPEREDL LLEEAQCLDN STSDEPYVGL EFESEAAAHA FYNAYATRVG FIIRVSKLSR  180
SRRDGSAIGR ALVCNKEGFR MPDKREKIVR QRAETRVGCR AMILVRKVNS GKWVVTKFVK  240
EHSHPLCPGK GRRDLIYDQY PNEHDKIREL SQQLAAEKKR SATYKRHLEM IFEHIEEHNQ  300
SLSKKIQDIV HNDEKDDRIQ ELTAELRIKK RLTAACREQL LSLMKDVESH TEHLSTKVQA  360
VRSILEELEA KKQELSNHSR HHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-90	FAR1 family protein