PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT28083.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 238aa    MW: 26392.4 Da    PI: 8.2176
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT28083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.46.3e-19371141699
                 EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 l +pkkfa++    ++ +  ++l+ +sg +W+v+l  +  +++ +l++GWkeFv+a+ L+e D ++Fk++g+s+f   v+vf++
  PHT28083.1  37 LAIPKKFANNLR--EKLGDSVSLTGPSGATWNVRL--TLIGDSLFLKDGWKEFVDAHSLEEDDLLIFKYNGSSRF--DVSVFDR 114
                 78******5444..457779***************..888888**************************998999..9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MGISGNYREV MMMCREDSVS GKGMEEEPHF WILLGPLAIP KKFANNLREK LGDSVSLTGP  60
SGATWNVRLT LIGDSLFLKD GWKEFVDAHS LEEDDLLIFK YNGSSRFDVS VFDRQSSCEK  120
EASCFVKKCE HADVASRRRT KRHTPREYSS RDVSEAPPTK KSKLAATPTS EDTSKSSSHD  180
EYEPPAKKKT LASTSTSADT NESSSHNEGE PLTEKKTTLA STSTSRTRCA RANAKLRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-25B3 family protein