PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT28329.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Nin-like
Protein Properties Length: 217aa    MW: 23760.1 Da    PI: 9.8025
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT28329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK20.97.1e-071551693852
      RWP-RK  38 qyGIkRWPhRkiksl 52 
                 q+GI+RWP+Rki+++
  PHT28329.1 155 QHGISRWPSRKINKV 169
                 89***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MLRSISYVKD VRGEALRHQA SQCLADGGGF KKAVVALMEA TWDNVANGRT RCDLIEEQQS  60
HVELNGAKGA EGVNGTAEDH NYSSFSENKQ TGKKSERKRG KNKKTISLEV LQQHFAGSLT  120
DAVKSLGGML FKILGTYSSL CIAYNNCPLF PLPVQHGISR WPSRKINKVN RSLSKLKRVI  180
ESMQEADGTF SLTSLAPNSL PITIGSIYWP TGMTDSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.16e-26Nin-like family protein