PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT28365.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 301aa    MW: 32903.6 Da    PI: 8.6097
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT28365.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.13.8e-3278132358
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  ++rY+eClkNhAa++Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+e++
   PHT28365.1  78 AARYRECLKNHAANIGGNVTDGCGEFMPS-GEEGTLEALKCAACNCHRNFHRKEQN 132
                  689*************************9.999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MSLAGEEKEM RMPGSLGYHS LDQNTDQGGN HVHPSNIQDH EKSTGGGGAT TAGTGVAPYN  60
SAGGITGSNK FNKVSSRAAR YRECLKNHAA NIGGNVTDGC GEFMPSGEEG TLEALKCAAC  120
NCHRNFHRKE QNIGGGDNNN NAGIMVVHPL QLPQPLPSPI PSLNHHHHHQ HGGRSIWTTM  180
PPQPVKMAFG GSGGSGATDS SSEELNFNTY HHQQATSVPP QPQPPFVLAK KRFRTKFSQE  240
QKDKMLEFAE KLGWRIPRED DTEVQRFCSQ VGVKRQVFKV WMHNNKNPSA KKNTLQEDQQ  300
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.12e-51ZF-HD family protein