PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT28401.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 92aa    MW: 10800.5 Da    PI: 8.9882
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT28401.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.4e-0533531030
                HHHHHHHHHHHHHHHCTSCCC CS
         HLH 10 rrRRdriNsafeeLrellPka 30
                r RR+r  s++++L ++lP+ 
  PHT28401.1 33 RMRRSRSSSKIQKLAKILPTY 53
                99*****************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MYIPINYGDE FHWVLAVVVL KEKRIRVYDS MSRMRRSRSS SKIQKLAKIL PTYLDMSGFL  60
DQKVCTDWST IEAYQDKMAN PFDVQYVDGI AQ