PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT28531.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 501aa MW: 55485 Da PI: 4.5636

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT28531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.9	2.1e-35	32	123	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sws++ nsfvv+d+ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ w+F+++ F +g+k+ll++i PHT28531.1 32 FLMKTYDMVDDPSTDKIVSWSSTDNSFVVWDPPEFARELLPKYFKHNNFSSFVRQLNTYGFRKVGSDL---------WKFSNDGFIRGQKHLLRNIS 119 9******************999************************************9887.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PHT28531.1 120 RRKP 123 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MGSASMEDAG EASPAPEPSP APMSSSNAPP PFLMKTYDMV DDPSTDKIVS WSSTDNSFVV 60 WDPPEFAREL LPKYFKHNNF SSFVRQLNTY GFRKVGSDLW KFSNDGFIRG QKHLLRNISR 120 RKPAHGHSQQ QQLHGQSASV GVCVEVGKFG LEEEVERLKR DKNVLMLELV KLRQHQQNTD 180 NQMQTVVQSL HIMEQRQQQM MSFLAKAVNS PGFLAQFVQQ QNESNKRMIE RSKKRRIGQD 240 NPSGDLSVSP ADGQLVKYQP VMKEAAKAML RQITKLDSSP RLESLSNSPE SLLIGDGSPQ 300 CKSLDGGSNN QISGVTLQEV PPASPQPFAS ATSAVAGQSS FSANIQFSES SSPVGAQDSP 360 PVLLSPSDMI MPEPSQFQEI VPENNMDING SETGIDSLMD SILGRNGKLP SEIDTFSPDL 420 QTEWQSTLMD DIGELPSVGD PFWEKFLQNL FPTETEEMDS LEVEDIESTE TKPLENGRDN 480 VQHMEDLTEQ MGQLTSNSKK V

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MGSASMEDAG EASPAPEPSP APMSSSNAPP PFLMKTYDMV DDPSTDKIVS WSSTDNSFVV  60
WDPPEFAREL LPKYFKHNNF SSFVRQLNTY GFRKVGSDLW KFSNDGFIRG QKHLLRNISR  120
RKPAHGHSQQ QQLHGQSASV GVCVEVGKFG LEEEVERLKR DKNVLMLELV KLRQHQQNTD  180
NQMQTVVQSL HIMEQRQQQM MSFLAKAVNS PGFLAQFVQQ QNESNKRMIE RSKKRRIGQD  240
NPSGDLSVSP ADGQLVKYQP VMKEAAKAML RQITKLDSSP RLESLSNSPE SLLIGDGSPQ  300
CKSLDGGSNN QISGVTLQEV PPASPQPFAS ATSAVAGQSS FSANIQFSES SSPVGAQDSP  360
PVLLSPSDMI MPEPSQFQEI VPENNMDING SETGIDSLMD SILGRNGKLP SEIDTFSPDL  420
QTEWQSTLMD DIGELPSVGD PFWEKFLQNL FPTETEEMDS LEVEDIESTE TKPLENGRDN  480
VQHMEDLTEQ MGQLTSNSKK V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-119	HSF family protein