PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT28543.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 203aa    MW: 22895.9 Da    PI: 9.0894
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT28543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.72e-133577754
                HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                  Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A++YI++L
  PHT28543.1 35 VSERNRRKKVNERLFALRAVVPNiS------KMDKASIIKDAIDYIQNL 77
                57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MAHQVKCYFD EAISSYYDSS SPDGAQSSMA SKNIVSERNR RKKVNERLFA LRAVVPNISK  60
MDKASIIKDA IDYIQNLHEQ ERRIRAEILV LESGRSKKNS DVEFDQDGSF DSKPKRSKRL  120
EQKYEYDSSG STTRSSPSSF PVDVLELRVS SMGENTVVVS LTCSKRTDTM IKVCEVFESL  180
NIKIISANIT AFSGRLLKTA FIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.31e-68bHLH family protein