PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT28764.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 238aa    MW: 26501.8 Da    PI: 8.0362
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT28764.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57347.64.7e-15841401874
      DUF573  18 GlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaks 74 
                 G +++k++ g +p++d++ fyef+k++++++vsksql++K r L+kKf k vk+ + 
  PHT28764.1  84 GKVKYKEQIGIEPKADMSTFYEFIKEKLQANVSKSQLSDKTRTLQKKFIKSVKDGEM 140
                 5589**********************************************9998443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MRWVNKKASL MIHAFLASSC DVVVYELQLK LSYAVDTMGM GLHRLQCSWS PSKIQRIEYC  60
PCPVILITAS GLQGEQPLVD GIIGKVKYKE QIGIEPKADM STFYEFIKEK LQANVSKSQL  120
SDKTRTLQKK FIKSVKDGEM MLDDKAKILE EKCKNLDDAK ATLILNHLDF IREHCGLVVD  180
GMRDCCSSSG DSSTCSSFKE KVEGGGSPKR DLSLGAMVEC KQEDSKWCRV STSSPLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-08GeBP family protein