PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT28786.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 408aa MW: 45346.9 Da PI: 6.0582

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT28786.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.5	1.5e-10	260	300	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L++l+P+ +K++ +++Le+Av+Y+k Lq PHT28786.1 260 RKRRERINERLRILQSLVPNG-----TKVDISTMLEEAVQYVKFLQ 300 9****************97.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MEPVVAMSEG EWSSLSGTCS TEEANFMAQL FGSCPNELPS SSNMGLPIFW TSHESNIGGT 60 SEISMYSSDD ANSSMYHFPS SSNFQPMLLR NNTSMTMEQS SLPPANNIIE ADAIEFLNKE 120 ASNDSMESGE NNMPESVLHG QGLQLGREYD QMQVPEQSEG SKKRSRSPVD HIPKNKRSVK 180 PKKNMKSVID DEIGMKENNN TNLLHRQSSF SCCSEDESNV SSYDLYGLAS SDNSKGVSAP 240 NRKSRANRGS ATDPQSLYAR KRRERINERL RILQSLVPNG TKVDISTMLE EAVQYVKFLQ 300 LQIKLLSSDD LWMYAPIAYN GMDIGLDLKI GIPNPKSQSA VHLARNSKHH SMTKHIDIKR 360 HFIRDIVDAG EITVEKIHTT ENPADMLTKP LPAAKFDHCL DLAGIIHC

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MEPVVAMSEG EWSSLSGTCS TEEANFMAQL FGSCPNELPS SSNMGLPIFW TSHESNIGGT  60
SEISMYSSDD ANSSMYHFPS SSNFQPMLLR NNTSMTMEQS SLPPANNIIE ADAIEFLNKE  120
ASNDSMESGE NNMPESVLHG QGLQLGREYD QMQVPEQSEG SKKRSRSPVD HIPKNKRSVK  180
PKKNMKSVID DEIGMKENNN TNLLHRQSSF SCCSEDESNV SSYDLYGLAS SDNSKGVSAP  240
NRKSRANRGS ATDPQSLYAR KRRERINERL RILQSLVPNG TKVDISTMLE EAVQYVKFLQ  300
LQIKLLSSDD LWMYAPIAYN GMDIGLDLKI GIPNPKSQSA VHLARNSKHH SMTKHIDIKR  360
HFIRDIVDAG EITVEKIHTT ENPADMLTKP LPAAKFDHCL DLAGIIHC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14760.1	1e-50	bHLH family protein