PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29012.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 419aa    MW: 45849.3 Da    PI: 7.8952
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29012.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.25.4e-1074109645
         AP2   6 VrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAaka 45 
                 Vr +k +g+++ eIrd +     + kr++lg+f taeeA + 
  PHT29012.1  74 VRKRK-SGKFATEIRDpF-----SkKRIWLGTFNTAEEASEI 109
                 89888.7*********66.....44**************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MSDSLTSDSL KNKKFTTEYE EMLKLAKNAK VKRAISAKTE IGSSSSEVKF QSLSLINRKS  60
LSFDQVSGKL PPMVRKRKSG KFATEIRDPF SKKRIWLGTF NTAEEASEIY QSKKLEFQEK  120
LNKAKNANKK KAISAKCELG LSSSDPPLMA DAQTSDSSNE LGDQFNKAKN AKEKKAISAK  180
LGLGSSSDPP LMMDSQTSDT LKEFVEQLKK AKSAKVQKAI SAKFGLGCSS SDPPLMVHSL  240
NSDTSNLFDD RSKNTVNAKE EKTISAKFGL EFCSSDSQTS DSSNELDDRS KKAENAIVKK  300
AISAKFGLEF CSSDTQTLDS SNELDDRSKN AENAIVKEAI SAKFELGTSS SDPSSTVDSQ  360
TSDSSNDQES EEELWMGQWI RISGDKEVKF SQKSGVPVVD NYGFLLGEFS KLDDLSISL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-15ERF family protein