PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29015.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 114aa    MW: 13291.2 Da    PI: 8.8366
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29015.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.12.2e-081964554
         AP2  5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                GVr ++ +g++ AeI++p +   +k ++lg+f t e+  k ++  ++++e
  PHT29015.1 19 GVRKRR-NGKFCAEIKHPLN---KKMIWLGTFVTVEDVLKNYESKKRRFE 64
                9**887.8*********743...5*************9999999888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MKFYKRISKN TCVRLYPIGV RKRRNGKFCA EIKHPLNKKM IWLGTFVTVE DVLKNYESKK  60
RRFEELVMAK SAKNVQISEK SDQESCVTDE FEEKSSMSVD EITNTSNGVE ESDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.16e-14ERF family protein