PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT29220.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 166aa MW: 19027 Da PI: 6.5169

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT29220.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.1	2.8e-31	103	161	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk+s++pr+YYrC+ +gCpvkk+ver++ed ++v++tYeg Hnh+ PHT29220.1 103 LDDGYKWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRVERDKEDSRYVITTYEGVHNHQ 161 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MAANNPSANM LDGSFRSLDS PDSDDFSNHL INFELSDILE IDNWPIQQDP TLIPQYSNYA 60 ANQVVNTSSY HEEPSNNIGS SSSKRKEVKD KVAFRTLSQI EILDDGYKWR KYGKKMVKNS 120 PNPRNYYRCS VEGCPVKKRV ERDKEDSRYV ITTYEGVHNH QGLSPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	4e-41	WRKY family protein