PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT29836.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 245aa MW: 27821.4 Da PI: 4.7557

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT29836.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	58.1	3e-18	6	127	4	127
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100 ++FhP + el+ + Lk+ ++g++l++ ik ++iy Pw+L +e+k+ yf ++ +k++++++++ r+ +g+W+ + + +++++ +g++v PHT29836.1 6 SIQFHPVEAELI-NLLKRFLKGEHLRC--PIKFAEIYGDqPPWQLY---GSEDKSGYFITPLKKRKKSDQKHARTCGNGTWRGQTSAVPIKNRkGGSVV 98 579*******.99*****998..79999999763685...5678899********************************99867888 PP NAM 101 glkktLvfy.kgrapkge.ktdWvmheyr 127 g ++ ++ kg++ +g+ t+W+m ey PHT29836.1 99 GYRRNYIYTsKGNKTSGSaTTNWLMREYF 127 ******9666666665389*****6 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MSSAVSIQFH PVEAELINLL KRFLKGEHLR CPIKFAEIYG DQPPWQLYGS EDKSGYFITP 60 LKKRKKSDQK HARTCGNGTW RGQTSAVPIK NRKGGSVVGY RRNYIYTSKG NKTSGSATTN 120 WLMREYFVGD DFFKVNNIPK QDYALCRIKK HVRGKMDDDD DAVNMEEQDA LETIQGMLLE 180 PDSTCCTTQE VAEETDQWES IINEVCDEKI DGVENAVMNW ADDLFIDITD LGDIICCPSE 240 SILEI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	66	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	6e-15	NAC family protein