PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29841.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 272aa    MW: 32037 Da    PI: 9.1053
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3451.9e-141095199
                EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                ffk l     +k+g l +p  f+ ++ +g+   +++  +  +  + W vk+  ++++    +++GW  Fv++++L+ gD ++F+++g++ef  +v++f++
  PHT29841.1 10 FFKPL--QKGFKHG-LKIPTGFL-KYlKGQ--DQIEHAVLRKGVKNWLVKV--NGGR----FEAGWAAFVEEHDLQLGDLLIFRHEGDMEF--KVSIFDS 95
                56666..5555555.********.554666..567888899999*******..8887....9***********************999999..9*99987 PP
2B354.71.8e-17141222590
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 +++++  ++g l+lpk+fa e+++++ +++ l+++de+ rsW+++l  + +s+ ++++ GW++F  an+LkegD ++F+++ + ++
  PHT29841.1 141 TVKPYCISNGYLRLPKEFAMENNLIN-KKRCLIIRDERQRSWNLRL-ATHNSRVHIFG-GWSKFRIANDLKEGDYMMFEVIAD-GE 222
                 6789999***************6664.4457999************.34444456666.********************9875.33 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MKIPPKKPHF FKPLQKGFKH GLKIPTGFLK YLKGQDQIEH AVLRKGVKNW LVKVNGGRFE  60
AGWAAFVEEH DLQLGDLLIF RHEGDMEFKV SIFDSSHCNR EYAEYLQEEE GSDNVEEISK  120
NFKLKDAGTH NPCGQSHFEC TVKPYCISNG YLRLPKEFAM ENNLINKKRC LIIRDERQRS  180
WNLRLATHNS RVHIFGGWSK FRIANDLKEG DYMMFEVIAD GEKPIWKFHG KLFQFKQPFF  240
FNDPFNFFIY IMTLYCIFVK IIVFGSPYYQ IN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.12e-32B3 family protein