PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29842.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 407aa    MW: 47330.6 Da    PI: 4.7753
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.43e-142731899
                --HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                +p  f+ ++ +g    +++ ++  + g++W v++  ++++    l++GW++Fv++++L+ gD+++F+++g+++f   v++f++
  PHT29842.1  2 IPIGFL-KYlKGH--DHIEHVVLKRAGNKWLVRM--NGRR----LEDGWEKFVEEHDLQLGDILIFRHEGDMDF--DVSIFDS 73
                677777.443433..4567899999*********..8888....******************************..9999986 PP
2B352.68.5e-17145229594
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 +++ + l++g +++pk+fa+++ +++++   ++++d +  sW++ + y++++++ ++++GW+eF+  n LkegD ++F+ +++ + ++ +
  PHT29842.1 145 TIKQYCLSRGFMCIPKQFAQDNRLNNRK-CNIIMRD-EQSSWTFSV-YTNGKNS-IIRSGWREFCIMNCLKEGDRLMFEIVSN-GDTPIF 229
                 5678999***************888655.4899999.5679*****.5666555.79**********************8875.444555 PP
3B348.91.2e-15302379586
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                 ++++++ k++ l+lp +fa+++g+  ++  +++l de+ rsW+v l   + + ++ + +GW +F kang+++gD+  F+l+ 
  PHT29842.1 302 TIKPYTIKNSTLYLPLDFAKSNGLMDKS--EMILVDEKQRSWSVWL--GRMGHHFGILRGWTQFKKANGVQVGDTYKFELTY 379
                 56899*****************877433..8***************..88888899999********************864 PP
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
KIPIGFLKYL KGHDHIEHVV LKRAGNKWLV RMNGRRLEDG WEKFVEEHDL QLGDILIFRH  60
EGDMDFDVSI FDSTHCDTEY AEYKQIQEEK DKRVEDENED DEVVEDENDE EEEQEEDDDD  120
DDDDDEDDEV YTHDRPFGRS HFEFTIKQYC LSRGFMCIPK QFAQDNRLNN RKCNIIMRDE  180
QSSWTFSVYT NGKNSIIRSG WREFCIMNCL KEGDRLMFEI VSNGDTPIFR FHGNFSFDSV  240
VSINKLDLRG SPSLQAEVKM KILDAERMSD KGRRLKTSST TTPESQVAAS TSVDVNSHFI  300
STIKPYTIKN STLYLPLDFA KSNGLMDKSE MILVDEKQRS WSVWLGRMGH HFGILRGWTQ  360
FKKANGVQVG DTYKFELTYN GTIPIVHFHC NYSGKDAVVD GQKETSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.18e-40B3 family protein