PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29843.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 459aa    MW: 53569.6 Da    PI: 7.4387
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.54.4e-12781501899
                 --HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 +p  f+ ++ +g+  e+++  +  ++g++W+vk+  ++++   + +++W +Fv++ +L++g ++vF+++g++ef   v++f++
  PHT29843.1  78 IPIGFL-KYlKGQ--EHVKCGVLKRDGKKWRVKV--NGRK---LEEGNWGKFVEEFDLQVGNILVFSHEGNMEF--EVSIFDS 150
                 788888.454666..67889999***********..7776...77999*********************99999..9999986 PP
2B347.82.7e-15354432587
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 +++++ l++g+l+lp +fa+++g++ ++  +++l+de  r W+v l   +    + +t+GW +F   ngL++gD   F+l+++
  PHT29843.1 354 TIREYCLSRGLLYLPLDFAKSNGLNRKC--EMILKDEIERCWSVWL--GRLETNFCITRGWTKFRTGNGLQVGDAYKFELIKN 432
                 5788999******************666..8***************..999999*************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    
MFVTKLNRLL CVDGKLYYLY VIKIIFYIIQ VEPLLVRIFT FSYLVHLLFH ILNPGSDNPN  60
TAWPIWDKTN FFVLLQKIPI GFLKYLKGQE HVKCGVLKRD GKKWRVKVNG RKLEEGNWGK  120
FVEEFDLQVG NILVFSHEGN MEFEVSIFDS SQCSREYAEY MQEDVVEDEM DEEYEYEYEE  180
EEEEEEEVAT HDKPCEKSHF EYTTATNKPF IRSHFECTIT QKMFSRGLLY VPQHIAIANG  240
LTNKKCGLIV RDERQRSWNL KLSFGGTRVL TYIGYGLRKI IAENCTKEGD RINFEVVTNG  300
KTPIWKFQVF TDGEIPMKTF QGKPSRSIKL SNETSSHAEA AANKPFAQSH FECTIREYCL  360
SRGLLYLPLD FAKSNGLNRK CEMILKDEIE RCWSVWLGRL ETNFCITRGW TKFRTGNGLQ  420
VGDAYKFELI KNGKIPIAHF YCKFSFNSNV FLLRLSSML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.19e-37B3 family protein