PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29845.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 288aa    MW: 33467.6 Da    PI: 8.5539
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29845.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.51.5e-151695999
                HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                  +k+g l +p  f+ ++ +g    +++ ++  + g++W vk+  ++++    l++GW++F+++++L+ gD+++F+++g+++f   v++f++
  PHT29845.1 16 PGFKNG-LKIPIGFL-KYlKGH--DHIEHVVLKRAGNKWLVKM--NGRR----LEDGWEKFAEEHDLQLGDMLIFRHEGDMDF--DVSIFDS 95
                566666.********.664555..567899999**********..8888....******************************..9999986 PP
2B354.62e-17142228596
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 ++++++l++  l++pk+fa+e+ ++ ++   +++   + rsW++ +    +++ +++++GW eF+  n LkegD ++F+++++ ++++++++
  PHT29845.1 142 TIKPYSLSKYFLCIPKRFAQENRLIDRKC-NIIMS-DKQRSWTFSV--YTSGEITYFGRGWHEFCITNCLKEGDRLMFEMISN-GETPRLRF 228
                 57899999999***********8886654.56655.599*******..888889*************************9985.44455544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEIPPKKPHF FKPILPGFKN GLKIPIGFLK YLKGHDHIEH VVLKRAGNKW LVKMNGRRLE  60
DGWEKFAEEH DLQLGDMLIF RHEGDMDFDV SIFDSTHCDT EYAEYMQIQK EKEKEIKTSG  120
KAFSNVEATM DMHLSRSQFI CTIKPYSLSK YFLCIPKRFA QENRLIDRKC NIIMSDKQRS  180
WTFSVYTSGE ITYFGRGWHE FCITNCLKEG DRLMFEMISN GETPRLRFHD LRGSPSLQAE  240
VKMKKLDAER MSDKGLRLKI SSTPTPESQV AASEHAYSRI TSGCFNIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.13e-33B3 family protein