PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30132.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 817aa MW: 91341.1 Da PI: 9.1086

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.8e-09	412	449	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + PHT30132.1 412 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 449 554459******************************88 PP
2	BELL	120.7	6.5e-39	276	347	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kkakL+++leeV++rY+qy++q+q+++ssFe+vag+gsak+Yt+lAl+aiS++FrcLkdaiaeqi PHT30132.1 276 QRQELQMKKAKLVTMLEEVEQRYRQYHHQMQIIVSSFEQVAGIGSAKSYTQLALHAISKQFRCLKDAIAEQI 347 69*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MYYGGTSDNN IQADQHHHAN NNIQTLYLMN PNSYMQGYNT TTDTQQQQQQ LLFLNSSPAG 60 NNALNPGNIP HAPLQHQQHF VGVPLPAVSL HDQINHHGLI QRLWNNQSGG HHHHESHQVI 120 PSSVVVSTTT DLASQLGFQR PIVVSPTPQH RQQQQQQQQQ GGLSLSLSPQ QQQQISFNNI 180 SSTSSPRTNS ITIRGSLDGG SSNMVLGSKY LKAAQELLDE VVNIVGKSIK RNDHQKKEEN 240 SMNKESMPLT SDVNTSSGTG SSRPKNEVAA ELTTAQRQEL QMKKAKLVTM LEEVEQRYRQ 300 YHHQMQIIVS SFEQVAGIGS AKSYTQLALH AISKQFRCLK DAIAEQIKAT SKSLGEEEGI 360 GGKIEGSRLK FVDHHLRQQR ALQQLGMMQP NAWRPQRGLP ERAVSVLRAW LFEHFLHPYP 420 KDSDKIMLAK QTGLTRSQVS NWFINARVRL WKPMVEEMYL EEVKNQEQNS TTSQDDKNKE 480 NNIMVSKSIA PHEEKQPITT SLLQDGTEIS TSTISTSPTV DAASLQAQHP HNFSFLGTFN 540 MENTTTNTTA VVDHIENNAK KPRNDMQKYS PSSILSSVDM EAKARESSNK GFNNPLMAAY 600 AMGDFGRFDP HEQMTANFHG NGVSLTLGLP PSENLAMPVS QQNYLSNQNI HMGSRPEMGS 660 HYNRMGYESI DFQSGNKRFP TQLLPDFVTA YVQLMDELNI VRPSPLRLNG PGPVKSTLSG 720 RSTPRGGSLS FRRLNSGRTP RRDGKSDAFS SEWFRSNRIV LWLLLIILWA YGGFYVQSRW 780 VHGDNKEGIF GGSEGDVANV TSQPEEKVQR ILVTSEN

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MYYGGTSDNN IQADQHHHAN NNIQTLYLMN PNSYMQGYNT TTDTQQQQQQ LLFLNSSPAG  60
NNALNPGNIP HAPLQHQQHF VGVPLPAVSL HDQINHHGLI QRLWNNQSGG HHHHESHQVI  120
PSSVVVSTTT DLASQLGFQR PIVVSPTPQH RQQQQQQQQQ GGLSLSLSPQ QQQQISFNNI  180
SSTSSPRTNS ITIRGSLDGG SSNMVLGSKY LKAAQELLDE VVNIVGKSIK RNDHQKKEEN  240
SMNKESMPLT SDVNTSSGTG SSRPKNEVAA ELTTAQRQEL QMKKAKLVTM LEEVEQRYRQ  300
YHHQMQIIVS SFEQVAGIGS AKSYTQLALH AISKQFRCLK DAIAEQIKAT SKSLGEEEGI  360
GGKIEGSRLK FVDHHLRQQR ALQQLGMMQP NAWRPQRGLP ERAVSVLRAW LFEHFLHPYP  420
KDSDKIMLAK QTGLTRSQVS NWFINARVRL WKPMVEEMYL EEVKNQEQNS TTSQDDKNKE  480
NNIMVSKSIA PHEEKQPITT SLLQDGTEIS TSTISTSPTV DAASLQAQHP HNFSFLGTFN  540
MENTTTNTTA VVDHIENNAK KPRNDMQKYS PSSILSSVDM EAKARESSNK GFNNPLMAAY  600
AMGDFGRFDP HEQMTANFHG NGVSLTLGLP PSENLAMPVS QQNYLSNQNI HMGSRPEMGS  660
HYNRMGYESI DFQSGNKRFP TQLLPDFVTA YVQLMDELNI VRPSPLRLNG PGPVKSTLSG  720
RSTPRGGSLS FRRLNSGRTP RRDGKSDAFS SEWFRSNRIV LWLLLIILWA YGGFYVQSRW  780
VHGDNKEGIF GGSEGDVANV TSQPEEKVQR ILVTSEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-94	TALE family protein