PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30232.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 165aa    MW: 19213.9 Da    PI: 8.6037
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30232.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.51.9e-17106551107
         NAM  51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLv 107
                 v+++++ew fF+++d+ky++ +r nrat++gyWk+tg+d+++++kkg+++g+kktL 
  PHT30232.1  10 VESNDNEW-FFCPKDHKYQNRQRLNRATERGYWKTTGEDRNITTKKGAKIGMKKTLL 65 
                 44555555.99********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MIEWLQISVV ESNDNEWFFC PKDHKYQNRQ RLNRATERGY WKTTGEDRNI TTKKGAKIGM  60
KKTLLIPNLN RLAKCPTFSG SILLDYIKSA LTINAEYNSC LDVQINEFYP KHLPMTTTYP  120
VYSHIVGRSD LKQDEHVENP NLDVEQNASL PNHLPKMNCQ RESLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.34e-18NAC family protein