PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30233.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 79aa    MW: 8811.05 Da    PI: 10.1443
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.11.7e-113476248
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                +y+GV  ++ + ++ Ae rdp++   r + +lg+f+ta+eAa+a++ 
  PHT30233.1 34 HYRGVKKRP-SRKYTAESRDPRK---RSNAWLGTFDTAKEAAQACDT 76
                7********.7******999854...59****************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MEKDCPQVET RVEKVKGGVA KAAEKVKGVA EDVHYRGVKK RPSRKYTAES RDPRKRSNAW  60
LGTFDTAKEA AQACDTMTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-16ERF family protein