PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30282.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 225aa    MW: 26209.4 Da    PI: 8.433
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM522.4e-16711433128
         NAM  33 vikevdiykv..ePwdLpk.....kvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgekt. 119
                  i+++d+y +   Pw+L k     + k++++++ yfF++ +kk+ +g++ nr ++  g Wk    +ke+++k+g+++g k+t+ f   + r+ + ++t 
  PHT30282.1   7 DIRHIDLYGIkkPPWELFKgllrsEGKTGTDQLnYFFTPLKKKSVKGRNFNRtIAGVGQWKGRDISKEIYDKEGSVIGSKRTFRFDeeSSRSDNNQRTv 105
                 4888998866438****74456543233333446******************66779****************************94423444445543 PP

         NAM 120 dWvmheyrl 128
                  W+m+ey+l
  PHT30282.1 106 YWIMKEYSL 114
                 8******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MPIECHDIRH IDLYGIKKPP WELFKGLLRS EGKTGTDQLN YFFTPLKKKS VKGRNFNRTI  60
AGVGQWKGRD ISKEIYDKEG SVIGSKRTFR FDEESSRSDN NQRTVYWIMK EYSLDETIVD  120
KLRQRDEIQK EDYVVCSIMR KVSSRKNSQD VPSKAENEVS NHHHRDNVPS SSAETCRPWP  180
YHDAAEIRSL PPLDGPFRSL NEEDLALFEK PDPGYPQAYQ NKKLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.19e-12NAC family protein