PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30338.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 237aa MW: 26624 Da PI: 6.5064

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.8	2.5e-33	30	83	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH++Fv+ave+LGG+++AtPk +l+lm+vkgLt++hvkSHLQ+YR+ PHT30338.1 30 PRLRWTQDLHRNFVHAVERLGGEDRATPKMVLQLMDVKGLTISHVKSHLQMYRS 83 8****************************************************7 PP
2	Myb_DNA-binding	50.2	5.8e-16	31	82	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg+ t+k + + m kg+t ++ks++q+y+ PHT30338.1 31 RLRWTQDLHRNFVHAVERLGGEdraTPKMVLQLMDvKGLTISHVKSHLQMYR 82 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MRLGQVEQPI LENSNKSSSG VRPYVRSKMP RLRWTQDLHR NFVHAVERLG GEDRATPKMV 60 LQLMDVKGLT ISHVKSHLQM YRSMKHEQMM QAEAEAANGI KRNRMDGPDQ LNYLNYYDGK 120 ALLDGHPNSK VTINYFNLIA STPNFSPAQW KDMQEKMMGL EGQSKPACNM FRDFFNGCTT 180 VQDGNYNIGE CGSSLSNNHC SIIDTEEEAQ DSSSTMSLEP SACLDHGTNI SLDLTLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	4e-33	G2-like family protein