PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30414.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 174aa MW: 19690 Da PI: 8.5901

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30414.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.6	1.4e-38	52	109	2	59
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 ++k+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk k PHT30414.1 52 PDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAK 109 68999***************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MAEVQESRIS QGIKLFGATI QVQEIKQAKV HQPTNKVDQD HDNNNNDQEK RPDKIIPCPR 60 CKSMETKFCY FNNYNVNQPR HFCKGCQRYW TAGGALRNVP VGAGRRKAKP PCGPGPHGDM 120 NGLSDGCFFD VTNHHGNSNN IHQLEFDGVV AEEDQWHLFQ AAKRRRSTSH TQSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29160.1	9e-51	Dof family protein