PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30419.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 329aa    MW: 37560.5 Da    PI: 5.8697
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30419.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix41.92.6e-1363153186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++q + +L++a  ++  +l+rg+l++++W+ vs+ +     + ++  r+ +qCk++++ l+k+yk +k+  ++ + + +s++p+f++l+
  PHT30419.1  63 CWSEQATWTLVDAWGRRYMELNRGNLRQKDWQFVSDSVnalhgHTKKSWRTDIQCKNRIDTLKKKYKVEKAKIIESNGTLKSSWPFFERLD 153
                 7*************************************999988889999*******************99999887777789*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MAGGNFAALD EASCWLVGII FRWFSIRSKA NGVGWCGGER EEGRGNAGEV TAPSRPLPFR  60
EDCWSEQATW TLVDAWGRRY MELNRGNLRQ KDWQFVSDSV NALHGHTKKS WRTDIQCKNR  120
IDTLKKKYKV EKAKIIESNG TLKSSWPFFE RLDLLIGNSD KKVTPVMASP LHLPLSSPPM  180
GVPLPYRRSP VVTPVVPLPQ KRQLPAFDDS SFRRNYSAVA AAAAAAGGEE DCDDDEEEEE  240
EDMEEMDEEG REDDGIRRLA KAIERFGEIY ERVEGMKQRQ MVELEKQRMQ FAKDLEVQRM  300
QLFMDTQVQL ERIKHTKRSG SDGIKLTPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.16e-50Trihelix family protein