PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30465.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 242aa MW: 27689.1 Da PI: 9.3653

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.4	1.8e-21	99	158	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ PHT30465.1 99 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 158 7***************99************************************97 PP
2	Wus_type_Homeobox	118.3	3.5e-38	99	160	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq PHT30465.1 99 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 160 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MYMGSSGSLT MKVHQFTRGF LEHEATTTAP PSLTLGCKRL RPLAPKLTST TNNDSTTIVT 60 PPFDLKSFIR PESSTSPPKH AFNEEKKDSS QVESHPGGTR WNPTQEQIGI LEMLYRGGMR 120 TPNAQQIEQI TAQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNSLGLSQS PRTPPAIVTS 180 PLSFDTRGEV VREEDSPYKR KCRGWTFEYL EEEQQEEEEK RSCRENGDRT LQLFPLHPEG 240 MR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	2e-75	WOX family protein