PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30477.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 250aa    MW: 27686.4 Da    PI: 8.4697
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08148188954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PHT30477.1 148 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 188
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MDIDMLKSAA GCEDQMEMML MMQLDKFPDF TTGNSSELPV MEFSPQGSCN SNNNNYNYHQ  60
LDQNSPNFLN MPSTISFTNS PPMHQSPNFL ANSGAFNSHS MNRSNMAAMR EMIFRIAAMQ  120
PINIDPESVK PPKRRNVKIS TDPQSVAARH RRERISERIR ILQRLVPGGT KMDTASMLDE  180
AIHYVKFLKN QVQSLERAGA NRPSNGTAVT AAAAAAAGLG FPVPMSLSGN YNLPVSTKSC  240
YQNIQQYADV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.13e-42bHLH family protein