PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30594.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 115aa    MW: 13497.7 Da    PI: 9.0447
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.14.8e-1617951099
                HHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 10 vlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                 +++  l +p  f+ ++ +g    +++ ++  + g++W vkl  ++++    +++GWk+F+++++L+ gD+++F+++g+++f   v++f++
  PHT30594.1 17 GFNN-GLKVPIGFL-KYlKGH--DHVEHVVLKRAGKKWLVKL--NGRR----FKDGWKKFAEEHDLQLGDMLIFRHEGDMDF--DVSIFDS 95
                4444.5999****9.665444..4677899999*********..8887....9*****************************..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MEVPPKKPHF FKPILPGFNN GLKVPIGFLK YLKGHDHVEH VVLKRAGKKW LVKLNGRRFK  60
DGWKKFAEEH DLQLGDMLIF RHEGDMDFDV SIFDSTRCDT EYAEYLQEKK IGELL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.14e-27B3 family protein