PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30635.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SRS

Protein Properties

Length: 193aa MW: 22042.7 Da PI: 8.3187

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	162.2	3.1e-50	17	144	5	154
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkelets 103 +CqdCGnqakkdC + RCRtCCksr ++C+thvk tW+p++ rr r+ l++ ++ ++kr re+ ++ +al +t+ + PHT30635.1 17 YRRCQDCGNQAKKDCPFLRCRTCCKSRRYQCQTHVKITWIPVSTRRPRH--LSTI--------QQPNPKRYREN--QNPAALLQTE----------GEE 93 568******************************************83..3332........34456777765..3344443333..........346 PP DUF702 104 slPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +lP+evs +avfrcvrvss+d+ +++aYqt+v+i+GhvfkGiLydqG+++ PHT30635.1 94 ELPAEVSLPAVFRCVRVSSLDNLVDQYAYQTSVNIAGHVFKGILYDQGPDD 144 7**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MMRSEDDQGI TISSSNYRRC QDCGNQAKKD CPFLRCRTCC KSRRYQCQTH VKITWIPVST 60 RRPRHLSTIQ QPNPKRYREN QNPAALLQTE GEEELPAEVS LPAVFRCVRV SSLDNLVDQY 120 AYQTSVNIAG HVFKGILYDQ GPDDDDNIPK ETSSRGFHQH LLTTNLTTPS TSYPTPFTNF 180 MPGTQYFQCP KSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	5e-47	SRS family protein