PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30688.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 542aa MW: 59237.6 Da PI: 5.8287

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.4e-16	356	402	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq PHT30688.1 356 VHNLSERRRRDRINEKMRALQELIPRC-----NKTDKASMLDEAIEYLKSLQ 402 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MNHSVPDFDM DDDYSIPTSS GLTRPKKSAM EEEEIMELRW QNGQVVMQSQ NQRSLKKSYI 60 GNGSGGSGDA VIPSDQAAGR EIRHVEETTQ HHLFMQEDEM TTWLHYPLDD PSFERDLYSD 120 YNTDLLYPMP SSTVTTATLP RESRTSTEEI RPPPPQLSPA APIVTAPRPP IPPPKRLVTE 180 SSNRFQNFRH FSRLPRTRLE PSPANLSKAP RDSTVVDSNE TPISGQESRV SNVADNVVPV 240 SGRNLGCSTI SGTGTATTSS AIREPAHTCE LSMTSSPGGS GNSISASAEP PAPAPSYKAA 300 AVAATPTTAG ADDRKRKVSE TEDGEGQNED TEFESPDTKK QARGSTSTKR SRAAEVHNLS 360 ERRRRDRINE KMRALQELIP RCNKTDKASM LDEAIEYLKS LQLQVQMMSM GCGMVPMMYP 420 GVQQYISPMG MGIGMGMGME IGMNRPMVPY PPLLPGAMMQ NAAAAAAQMG PRFPMPPFHL 480 PPVPVDPLQA SSQPDPTLNP LVAHNPNQPR LPNFNDPYQQ FFGLHQAQVA LPQASLPLLL 540 NP

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MNHSVPDFDM DDDYSIPTSS GLTRPKKSAM EEEEIMELRW QNGQVVMQSQ NQRSLKKSYI  60
GNGSGGSGDA VIPSDQAAGR EIRHVEETTQ HHLFMQEDEM TTWLHYPLDD PSFERDLYSD  120
YNTDLLYPMP SSTVTTATLP RESRTSTEEI RPPPPQLSPA APIVTAPRPP IPPPKRLVTE  180
SSNRFQNFRH FSRLPRTRLE PSPANLSKAP RDSTVVDSNE TPISGQESRV SNVADNVVPV  240
SGRNLGCSTI SGTGTATTSS AIREPAHTCE LSMTSSPGGS GNSISASAEP PAPAPSYKAA  300
AVAATPTTAG ADDRKRKVSE TEDGEGQNED TEFESPDTKK QARGSTSTKR SRAAEVHNLS  360
ERRRRDRINE KMRALQELIP RCNKTDKASM LDEAIEYLKS LQLQVQMMSM GCGMVPMMYP  420
GVQQYISPMG MGIGMGMGME IGMNRPMVPY PPLLPGAMMQ NAAAAAAQMG PRFPMPPFHL  480
PPVPVDPLQA SSQPDPTLNP LVAHNPNQPR LPNFNDPYQQ FFGLHQAQVA LPQASLPLLL  540
NP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	361	366	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.1	7e-37	bHLH family protein