PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30704.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 262aa    MW: 30288.6 Da    PI: 9.777
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind107.41.1e-33331242102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   F++k+y+i+ed++++++i w+  g+sfv++d+++f+ ++LpkyF+h+n++SFv QLn YgFkk+  ++         we+ h +F++gkk+ll +ik
    PHT30704.1  33 FITKTYDIVEDPNTNSIICWNPCGTSFVIWDHNRFSFEILPKYFRHTNMSSFVYQLNNYGFKKIALQK---------WEYGHYWFQAGKKHLLANIK 120
                   9****************************************************************998.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+ +
    PHT30704.1 121 RRGK 124
                   *965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MAMNNMVQFC TGQHEHGGGD GARMLREPGI PPFITKTYDI VEDPNTNSII CWNPCGTSFV  60
IWDHNRFSFE ILPKYFRHTN MSSFVYQLNN YGFKKIALQK WEYGHYWFQA GKKHLLANIK  120
RRGKNVNVQK DFHQEMYYHG VEEELRNQRD INDTLVSELE KLKQTQEDMV NGIASLKEYL  180
EKSEAESRKI ICFLAKAVKQ VAMKRGVKRT DVEVRDVTMS KRRVEDATES SKSSGKKNMI  240
DFSAIKRAHA IAQKPKIEKG SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.14e-46HSF family protein