PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30759.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 218aa    MW: 25054.6 Da    PI: 10.1032
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30759.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.98e-10131389128
         NAM   9 PtdeelvveyLkkkvegkkleleevikevd....iykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                 P+d+e++ +yL + v+gk++++++++ +vd    i  + P ++ +     +++++  y  + +d ++ +g+ ++ a   + Wk   k k++++++++++
  PHT30759.1  13 PSDKEMM-NYLVNYVKGKSFPIKHTVMDVDdrygIKVLSPTQILEstePPRKKKNTRYLITVQDLRKFEGNPSKGAL--AAWKCAPKLKRIFDANNRHM 108
                 9*****9.9**********99988777774455588889**996323222234456799999999988887777664..59****************** PP

         NAM 101 glkktLvfykgrapk..gektdWvmheyrl 128
                 g  k+  ++  ++p+   ++t+W m ey l
  PHT30759.1 109 GYVKISGYFVRDNPSlrLRRTEWHMREYIL 138
                 *****99996666551156*********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MLSGSSNGGC SIPSDKEMMN YLVNYVKGKS FPIKHTVMDV DDRYGIKVLS PTQILESTEP  60
PRKKKNTRYL ITVQDLRKFE GNPSKGALAA WKCAPKLKRI FDANNRHMGY VKISGYFVRD  120
NPSLRLRRTE WHMREYILSS KYLHPNKVER KKVLITLIVD TSKEEKGNND NNQNDGWKSM  180
MEITQSPQAG QQNDDVLSSQ QQQIMQSLQA LQLQHSSY