PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT30846.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 532aa    MW: 59671.5 Da    PI: 5.6194
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT30846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.53.8e-1261635322374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +elL +c eavs+ d + a+ l+  l++++s +g+pm+Rl ay++e+L+arl++++s +yk+l+++e +    se l+++++ ++++P++kf+++ aN 
  PHT30846.1 163 KELLDACSEAVSDADISTAEVLMDVLEQRVSVSGEPMERLGAYVLEGLRARLLSTGSIIYKKLKCEEPT---GSELLSYMQVIYNMCPYYKFAYMSANV 258
                 78999***************************************************************9...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                  I ea+ +e+r+HiiDf+i qG QW+ Ll+ La Rp+gpp +RiTgv+++es   +   l+ +gerLa++A+++gvpfef+  +a +  +++l++L+v+
  PHT30846.1 259 VIREAMMNENRIHIIDFQIAQGSQWIFLLHDLAHRPGGPPFVRITGVDDSESAyaRGGGLQIVGERLAEVAKSCGVPFEFHG-AALSGCEVQLSNLQVR 356
                 *************************************************998899999************************.8999************ PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                  gEalaVn+ ++lh+++desvs+ ++rd++L+lvkslsPk+v++veqe+++n+++Fl rf e+l+yy+a+f+s++a  pr+++eri+ E+++++r++vn
  PHT30846.1 357 YGEALAVNFPYMLHHMPDESVSTINHRDRLLRLVKSLSPKIVTLVEQESNTNTAPFLPRFRETLDYYTAMFESIDAARPRDNKERISAEEHCVARDVVN 455
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++acega+r+erhe ++kWr rl++aGF++ +ls ++ ++++ +l++++   yr  e++g+l+lgWk+r+L + SaWr
  PHT30846.1 456 IIACEGADRVERHELFGKWRLRLMMAGFTQCQLSPSVGETINDMLKEYS-PHYRYAESEGALYLGWKNRALATSSAWR 532
                 *************************************************.55*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    
MQASERPHMC GSVHALYNQP MQQCAPYRVF KNNCKDSHGS RTQLSFQAQN EQFFTLDSSP  60
ATDYIVYDSP PALSISSNRS PFSPQCSQSY MSDNACGLPL SRYSGVDDGD LRHVLRELEN  120
KLLGPESDTD NSSSCSFNDV VIKPSSLTRW NRVLDLAPSL NLKELLDACS EAVSDADIST  180
AEVLMDVLEQ RVSVSGEPME RLGAYVLEGL RARLLSTGSI IYKKLKCEEP TGSELLSYMQ  240
VIYNMCPYYK FAYMSANVVI REAMMNENRI HIIDFQIAQG SQWIFLLHDL AHRPGGPPFV  300
RITGVDDSES AYARGGGLQI VGERLAEVAK SCGVPFEFHG AALSGCEVQL SNLQVRYGEA  360
LAVNFPYMLH HMPDESVSTI NHRDRLLRLV KSLSPKIVTL VEQESNTNTA PFLPRFRETL  420
DYYTAMFESI DAARPRDNKE RISAEEHCVA RDVVNIIACE GADRVERHEL FGKWRLRLMM  480
AGFTQCQLSP SVGETINDML KEYSPHYRYA ESEGALYLGW KNRALATSSA WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein