PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT30895.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YB

Protein Properties

Length: 193aa MW: 21797.4 Da PI: 4.5051

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT30895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	169.8	3.1e-53	22	115	2	95
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 reqdrf+Pianv+rim+++lPa+akis+d+ket+qecvsefisfvtsea+++cqre+rkti+++d+lwa+++lGf+d++epl++yl++yre++g PHT30895.1 22 REQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEFISFVTSEANERCQREQRKTITAEDVLWAMSKLGFDDFIEPLTLYLHRYREFDG 115 89*****************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MEMSMGVPAQ ANNAEDSECS IREQDRFMPI ANVIRIMRRI LPAHAKISDD SKETIQECVS 60 EFISFVTSEA NERCQREQRK TITAEDVLWA MSKLGFDDFI EPLTLYLHRY REFDGGDRGS 120 LRGEPPLMLR RGVFDPPNHL LPPNFPMAHH QYGYFVYPPP PMGNGYMQGG GSTSHAALES 180 DDAESPTEDE GNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	1e-67	NF-YB family protein