PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31060.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 181aa    MW: 20492.7 Da    PI: 4.9786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-194999255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y GVr ++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+ +++g
  PHT31060.1 49 QYIGVRKRP-WGKYAAEIRDSTRNG--IRVWLGTFDTAEEAALAYDQAAFSMRG 99
                799******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MDSLRGGNRN FAIENISYEE IKNEDEEEII IFNNNDNIQD QENTQKEKQY IGVRKRPWGK  60
YAAEIRDSTR NGIRVWLGTF DTAEEAALAY DQAAFSMRGP STYLNFPVER VQESLRGFKY  120
TGQEGSTSIT EVIKEKHKKR NSKVDEVAPP LIKGRGFDLG YGENSVGSAV TLMGPATRYP  180
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-32ERF family protein