PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31061.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 186aa    MW: 21285.4 Da    PI: 8.7842
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.6e-194696255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y GVr ++ +g+++AeIrd + ng  +r++lg+f+taeeAa  +++a+ + +g
  PHT31061.1 46 KYIGVRKRP-WGKYAAEIRDSTRNG--RRVWLGTFDTAEEAALTYDQAAFCTRG 96
                89*******.**********44465..***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MQMDLKIHDE KKASKVSIVF REEVEVKVEV QSNEEIEVKF PKIPLKYIGV RKRPWGKYAA  60
EIRDSTRNGR RVWLGTFDTA EEAALTYDQA AFCTRGPSIS LNFPVEKVHE SLTKMECSYL  120
LQHGLMSPAA ALKEKHKKRS CTSRKNKKVM KKNVTIKEEE NVLIFEDLGS DLLDELLSEY  180
SSSSSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.19e-39ERF family protein