PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31303.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family M-type_MADS
Protein Properties Length: 201aa    MW: 23060.8 Da    PI: 5.8441
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF27.44.4e-091302150
                HHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF 21 lKKAeELSvLCdaevaviifsstgklyeys 50
                +KK  ELSvLC ++++ i++  +g + +++
  PHT31303.1  1 MKKTMELSVLCIVKACTIMVDADGMVETWP 30
                8****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MKKTMELSVL CIVKACTIMV DADGMVETWP RDRNDRYQHR HSLNKKKHTN NVAVENPKDV  60
LYKLDSKIEA WLLDRVTKKG WHEAQIRLGV GITHPLFDLI EACLTIDDQV ILVIRKTIAL  120
ILKEGFNMLK DDSGALGYTI VGKMRVEHVV VHYTLDMDME KQSIMDFGSD YVELGYKLEV  180
ELELESGDDV VFLTYPAVQL H